Information for 5-CTGGCTGTTTCTG (Motif 9)

G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G
Reverse Opposite:
G A T C G T C A A T C G C T G A T C G A T C G A G A T C C T G A A C T G T A G C T A G C T G C A C T A G
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.742
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif253.3
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets51.9 +/- 26.0bp
Average Position of motif in Background52.6 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGGCTGTTTCTG-
----CTGTTCCTGG
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCTGTTTCTG
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGGCTGTTTCTG--
---KCTATTTTTRGH
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGGCTGTTTCTG--
---GCTATTTTTGGM
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTGGCTGTTTCTG-
-----TGTTTATTT
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGTTTCTG
-TGGCAGTTGN--
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGGCTGTTTCTG---
----CTGTTGCTAGGS
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGGCTGTTTCTG----
--TTCTATTTTTAGNNN
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGGCTGTTTCTG
-TGGCAGTTGG--
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGTTTCTG
-BRRCVGTTDN--
 G A T C A C G T A C T G A C T G G T A C A G C T C T A G A C G T A C G T A G C T A T G C A C G T C A T G
A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T