Information for 8-ACATGGAGGGCAAGTG (Motif 8)

C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
Reverse Opposite:
A T G C G C T A A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T A G T C T G A C G T C A C A G T A C T G A C G T
p-value:1e-13
log p-value:-3.105e+01
Information Content per bp:1.703
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.9 +/- 24.6bp
Average Position of motif in Background52.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACATGGAGGGCAAGTG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG-
------AAGGCAAGTGT
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACATGGAGGGCAAGTG
----TNNGGGCAG---
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG
----TRAGGTCA----
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG-
----TAACGACACGTGC
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG
---CAAAGGTCAAGGG
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:ACATGGAGGGCAAGTG---
-------SDGCAGGTGCNS
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG
------AGAGGAAGTG
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG
--ATCAAGGTCA----
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ACATGGAGGGCAAGTG
-----AAGGTCAC---
 C G T A A G T C G T C A C A G T A C T G T C A G C G T A C A T G C T A G T C A G T G A C C G T A C T G A A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T