Information for 15-GAAGGGACAGTGA (Motif 35)

A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A C G T A C T G A C G T A T G C A G T C A G T C A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 21.8bp
Average Position of motif in Background35.5 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GAAGGGACAGTGA
AGAAAGTGAAAGTGA
 A C G T A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGGACAGTGA
GAAAGTGAAAGT--
 A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGGGACAGTGA
GGAAGTGAAAST--
 A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAAGGGACAGTGA
GRAASTGAAAST--
 A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAGGGACAGTGA--------
AAANNGAAAGTGAAAGTAAAN
 A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAGGGACAGTGA
CGGAAGTGAAAC---
 A C G T A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGGACAGTGA
AGAAACGAAAGT--
 A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAGGGACAGTGA-
TCAGNGAGCGTGAC
 A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAGGGACAGTGA
CCAGGAACAG---
 A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAGGGACAGTGA
GGAAANTGAAACTNA
 A C G T A C G T A C T G C G T A C G T A A C T G A C T G A T C G C G T A T A G C C G T A A C T G A C G T A C T G C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A