Information for 14-GAGATTTCAAGCACAT (Motif 18)

T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G G T A C A G C T A C G T A C T G C G T A C T G A C G T A G A C T A G T C C G A T A T G C
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.735
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.4 +/- 19.1bp
Average Position of motif in Background56.0 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT
--SCTGTCAVTCAV--
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT
--NCTGTCAATCAN--
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGATTTCAAGCACAT
-TGGTTTCAGT-----
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT
---CCATCAATCAAA-
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGATTTCAAGCACAT
TNNNNGGTGTCATNTNT--
 A C G T A C G T A C G T T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT-
-GAAGATCAATCACTAA
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T A C G T
A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAGATTTCAAGCACAT
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT-
-GAAGATCAATCACTTA
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T A C G T
A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT
------CCAATCAA--
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGATTTCAAGCACAT
-GSCTGTCACTCA---
 T A C G C G T A A C T G C T G A C G A T A G C T A C G T G T A C C G T A C T G A A C T G G T A C G T C A G T A C G T C A G C A T
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T