Information for 7-RGTCCGAGGCGGTGCM (Motif 8)

C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
Reverse Opposite:
C A T G A C T G A T G C G T C A A G T C G T A C C T A G A T G C A G T C G A C T A G T C A C T G A C T G T C G A A G T C A G C T
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 25.7bp
Average Position of motif in Background59.6 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:RGTCCGAGGCGGTGCM
----GGGGGCGGGGCC
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RGTCCGAGGCGGTGCM
GGGNGGGGGCGGGGC-
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RGTCCGAGGCGGTGCM
CAGGCCNNGGCCNN---
 A C G T C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RGTCCGAGGCGGTGCM
AGCCTCAGGCA-----
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RGTCCGAGGCGGTGCM
AGCCTCAGGCA-----
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RGTCCGAGGCGGTGCM
----GGGGGCGGGGC-
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RGTCCGAGGCGGTGCM
GAGSCCGAGC-------
 A C G T C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGTCCGAGGCGGTGCM-
---AGGGGGCGGGGCTG
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RGTCCGAGGCGGTGCM
NGCCTGAGGCN-----
 C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RGTCCGAGGCGGTGCM
ATTGCCTGAGGCAAT---
 A C G T A C G T C T G A A C T G A C G T A G T C A G T C C T A G C T G A A C T G A T C G A G T C A C T G A C T G A C G T A T C G A G T C G T A C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T