Information for 6-CCCGCAGCCTGCCCGG (Motif 7)

A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
Reverse Opposite:
A G T C T G A C A C T G A C T G C A T G A G T C G T C A A T C G A T C G A T G C A C G T A C T G A G T C A C T G A C T G C T A G
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.821
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.5 +/- 23.2bp
Average Position of motif in Background46.5 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCAGCCTGCCCGG
TACCCGCATN--------
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGCCTGCCCGG
TCGTACCCGCATCATT-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCAGCCTGCCCGG
GTACCCGCATN--------
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCGCAGCCTGCCCGG
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CCCGCAGCCTGCCCGG-
--------CTGCCCGCA
 A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCAGCCTGCCCGG
DCHCAGCAGGRGGCC---
 A C G T A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCGCAGCCTGCCCGG
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCCGCAGCCTGCCCGG
CTGGCAGNCTGCCA--
 A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCCGCAGCCTGCCCGG--
---SCAGYCADGCATGAC
 A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCAGCCTGCCCGG---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C A G T C A C T G A G T C C G T A A T C G A T G C A T G C A C G T C T A G G T A C A G T C A G T C A C T G C T A G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G