Information for 4-CCYRCGGRGAGSCCTG (Motif 5)

A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G A C T G A T G C A G T C A C G T A G T C A G C T A G T C A G T C A C T G A G T C T C G A A C T G A C T G
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.6 +/- 7.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:9
Orientation:forward strand
Alignment:CCYRCGGRGAGSCCTG-
---------AGGCCTNG
 A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCYRCGGRGAGSCCTG
--GGGGCCGAGGCCTG
 A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CCYRCGGRGAGSCCTG-
---------AGGCCTAG
 A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCYRCGGRGAGSCCTG
CCTGCTGAGH------
 A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCYRCGGRGAGSCCTG
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCYRCGGRGAGSCCTG
ATTCCCTGAGGGGAA-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCYRCGGRGAGSCCTG
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCYRCGGRGAGSCCTG----
---NNNNTGAGCACTGTNNG
 A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCYRCGGRGAGSCCTG
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCYRCGGRGAGSCCTG
CACCCCCGGGGGGG----
 A C G T A C G T A G T C A G T C A G C T C T A G A G T C A C T G A C T G C T G A A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T