Information for 2-CCACGCCAGGSCCAGG (Motif 3)

A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G A T C G A G T C A G T C A G C T A C T G A C T G G A T C A T C G A G C T A C T G A C T G
p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.829
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif42.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.2 +/- 22.6bp
Average Position of motif in Background43.6 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CCACGCCAGGSCCAGG----
------CAGGCCNNGGCCNN
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCACGCCAGGSCCAGG
-----CCAGGAACAG-
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCACGCCAGGSCCAGG--
--------TGCCCAGNHW
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CCACGCCAGGSCCAGG
-------AGGCCTAG-
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACGCCAGGSCCAGG---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCCAGGSCCAGG---
TCAGCACCATGGACAGCTCC
 A C G T A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCACGCCAGGSCCAGG---
-----ACATGCCCGGGCAT
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCACGCCAGGSCCAGG
---GGCCACRCCCMK-
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCACGCCAGGSCCAGG---------
-----YCAGGCWCAGTACCAGGCTC
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCACGCCAGGSCCAGG
-----CAAAGGTCAG-
 A G T C T G A C T C G A A T G C C A T G A G T C A G T C C T G A A C T G A C T G A T G C A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T