Information for 10-CGCGBGCGCGCSGGGC (Motif 10)

A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
Reverse Opposite:
A T C G T A G C A T G C T A G C A T G C A T C G T G A C T A C G A T G C C A T G A T G C T A C G A G T C C T A G A T G C T C A G
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.665
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.97%
Number of Background Sequences with motif1051.6
Percentage of Background Sequences with motif2.18%
Average Position of motif in Targets47.8 +/- 23.4bp
Average Position of motif in Background49.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGCGBGCGCGCSGGGC
GCGCCTGCGCA------
 A C G T A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGCGBGCGCGCSGGGC-
----TGCCCTGAGGGCA
 A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGCGBGCGCGCSGGGC-
----TGCCCNNAGGGCA
 A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCGBGCGCGCSGGGC
TGGCGCGCGCGCCTGA---
 A C G T A C G T A C G T A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGCGBGCGCGCSGGGC-
----TGCCCTNAGGGCA
 A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCGBGCGCGCSGGGC
GCGCATGCGCAG-----
 A C G T A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCGBGCGCGCSGGGC
GCGCATGCGCAC-----
 A C G T A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCGBGCGCGCSGGGC--
----GCCGCGCAGTGCGT
 A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Tcfl5/MA0632.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCGBGCGCGCSGGGC
GGCACGTGCC--------
 A C G T A C G T A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCGBGCGCGCSGGGC
NNCGCGTGNN--------
 A C G T A C G T A G T C T A C G A G T C T C A G A T G C A T C G G T A C T A C G A G T C A C T G T A G C T A C G A C T G T A C G A T C G T A G C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T