Information for 6-TTCCTGTCCRGRAKGG (Motif 8)

A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C T G A C A G C T A G C T G T A C A G C T T C A G A T C G C G T A A G T C C G T A A C T G A T C G G T C A C T G A
p-value:1e-12
log p-value:-2.923e+01
Information Content per bp:1.699
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.1 +/- 21.6bp
Average Position of motif in Background58.9 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTCCTGTCCRGRAKGG
---CTGTCTGG-----
 A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTGTCCRGRAKGG
NNTNNTGTCTGGNNTNG
 A C G T A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTCCTGTCCRGRAKGG
--GCTGTCAA------
 A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCCTGTCCRGRAKGG
--GCTGTG--------
 A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCCTGTCCRGRAKGG
-VBSYGTCTGG-----
 A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTGTCCRGRAKGG
ATTTCCTGTN--------
 A C G T A C G T A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTGTCCRGRAKGG
ACTTCCTGTT--------
 A C G T A C G T A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTCCTGTCCRGRAKGG
--CCTGTCAA------
 A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTCCTGTCCRGRAKGG
CACTTCCTGT---------
 A C G T A C G T A C G T A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTCCTGTCCRGRAKGG
---TWGTCTGV-----
 A G C T A C G T A T G C A G T C C G A T A C T G G C A T A T G C A G T C C T G A A C T G C T G A T C G A A C T G C T A G C T A G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T