Information for 22-CCTTTGCTTAGCA (Motif 44)

A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C A C G T C G T A C G T A A C T G A G T C C T G A G T C A C T G A A C T G A C T G
p-value:1e-3
log p-value:-9.107e+00
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 22.5bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTTTGCTTAGCA
CCTTTGTT-----
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTTTGCTTAGCA-----
---CCGCATAGCAACGGA
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTTTGCTTAGCA
CCTTTGTTTT---
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTTTGCTTAGCA-----
-NTNTTCTTATCAGTNTN
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGCTTAGCA
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTTTGCTTAGCA
-ATTTGCATAT--
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTTTGCTTAGCA-----
---TACCATAGCAACGGT
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTTTGCTTAGCA---
-CTTTGTTTACTTTTN
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTTTGCTTAGCA--
---BTVATTWGCATA
 A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGCTTAGCA
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A G C T A C T G A G T C A C G T A C G T C G T A A C T G A G T C C G T A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T