Information for 2-GGSACACARCCTGTCC (Motif 4)

C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C
Reverse Opposite:
T A C G A T C G C T G A G T A C C G T A A T C G T C A G G A T C C A G T A C T G A C G T A T C G A C G T T A C G A T G C G T A C
p-value:1e-14
log p-value:-3.286e+01
Information Content per bp:1.673
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.5 +/- 14.3bp
Average Position of motif in Background37.7 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGSACACARCCTGTCC--
---GVACAGNMTGTYCTB
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGSACACARCCTGTCC--
--AGNACAGNCTGTTCTN
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C A C G T A C G T
A C G T A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGSACACARCCTGTCC-
-NAGNACANNNTGTNCT
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGSACACARCCTGTCC--
---GRACAGWMTGTYCTB
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GGSACACARCCTGTCC
---------GCTGTG-
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGSACACARCCTGTCC
TGGCAGNCTGCCAG---
 A C G T C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGSACACARCCTGTCC
-----ACTTCCTGTT-
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGSACACARCCTGTCC--
---GAACADWATGTTCTT
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C A C G T A C G T
A C G T A C G T A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:GGSACACARCCTGTCC----
----------CTGTTCCTGG
 C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGSACACARCCTGTCC
CGAAGCACACAAAATA---
 A C G T A C G T A C G T C A T G A T C G A T G C G T C A T A G C T G C A A G T C G T C A C T A G A G T C A T G C C G A T A C T G A G C T T A G C A T G C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T