p-value: | 1e-10 |
log p-value: | -2.354e+01 |
Information Content per bp: | 1.710 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.87% |
Number of Background Sequences with motif | 4.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.3 +/- 28.9bp |
Average Position of motif in Background | 64.4 +/- 17.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGTCTAGCTTGGCCT NNTGTTTATTTTGGCA- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TGGTCTAGCTTGGCCT- --------NTTGGCANN |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TGGTCTAGCTTGGCCT ---------TTGGCA- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TGGTCTAGCTTGGCCT- -------NNTTGGCANN |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGGTCTAGCTTGGCCT--- ---NGTAGGTTGGCATNNN |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGTCTAGCTTGGCCT- TGACCTTTCGTGACCTT |
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Hic1/MA0739.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TGGTCTAGCTTGGCCT -------GGTTGGCAT |
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PB0122.1_Foxk1_2/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGTCTAGCTTGGCCT NNNTGTTGTTGTTNG---- |
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PB0120.1_Foxj1_2/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGGTCTAGCTTGGCCT GTNTTGTTGTGANNT----- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TGGTCTAGCTTGGCCT --------CTTGGCAA |
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