p-value: | 1e-12 |
log p-value: | -2.767e+01 |
Information Content per bp: | 1.754 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.87% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 61.3 +/- 25.4bp |
Average Position of motif in Background | 17.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGGCAGRARGTATGA TRAGGTCA---------- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGGCAGRARGTATGA AAGGTCAC--------- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGCAGRARGTATGA CAAAGGTCAG--------- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGGGCAGRARGTATGA TNNGGGCAG--------- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGGCAGRARGTATGA CAAGGHCANV-------- |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGGCAGRARGTATGA AAGGTCACGAAAGGTCA |
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PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGGGCAGRARGTATGA- ---TCAGNGAGCGTGAC |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGGCAGRARGTATGA TCAAGGTCAN--------- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGGCAGRARGTATGA AGGTCA---------- |
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RORA/MA0071.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGGGCAGRARGTATGA ATCAAGGTCA---------- |
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