Information for 6-GCGGCWAGGGAAA (Motif 7)

A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A
Reverse Opposite:
A C G T A G C T A G C T A G T C A G T C A G T C C G A T C G A T A T C G A G T C T A G C A C T G A G T C
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.798
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.0 +/- 22.9bp
Average Position of motif in Background57.6 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCGGCWAGGGAAA-
----CSTGGGAAAD
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCWAGGGAAA-
KGTTGCTAGGMAACA
 A C G T A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCWAGGGAAA-
RGSMTBCTGGGAAAT
 A C G T A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCGGCWAGGGAAA-
GTTGCCATGGNAAC
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCGGCWAGGGAAA
------TGGAAAA
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCGGCWAGGGAAA
AAGGCAAGTGT--
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCGGCWAGGGAAA--
---GAAAGTGAAAGT
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T A C G T
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCGGCWAGGGAAA-
----NATGGAAAAN
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCGGCWAGGGAAA-------
--GGAAAGCGAAACCAAAAC
 A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCWAGGGAAA
NNCGTTGCTATGGNN-
 A C G T A C G T A C G T A C T G G T A C A T C G A C T G A T G C G C T A C G T A A C T G A C T G C T A G C T G A C T G A G T C A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T