Information for 11-CCAGCTAACC (Motif 27)

A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C T G C T A G
p-value:1e-3
log p-value:-7.101e+00
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.8 +/- 30.0bp
Average Position of motif in Background52.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTAACC-----
ACTTAGTTAACTAAAAA
 A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCAGCTAACC-
---GCTAATCC
 A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAGCTAACC---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTAACC-----
GNNAGCTAATCCCCCN
 A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGCTAACC--
-NNACTTACCTN
 A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTAACC
NAHCAGCTGD--
 A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCTAACC----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTAACC
GCCACGTGACC
 A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

MYBL1/MA0776.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAGCTAACC--
ACCGTTAACGGT
 A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTAACC
NNGCAGCTGTC-
 A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T C G T A C G T A A G T C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T