Information for 16-CTCTGTGGCTGGT (Motif 18)

A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C C G T A A C T G A G T C G T A C G T C A A G T C C G T A A C T G C T G A A C T G
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.7 +/- 23.2bp
Average Position of motif in Background39.2 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCTGTGGCTGGT
GTCTGTGGTTT--
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTGTGGCTGGT--
---CGTGGGTGGTCC
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTGTGGCTGGT
-NNTGTGGTTT--
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCTGTGGCTGGT
--CTGTTCCTGG-
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCTGTGGCTGGT
NNHTGTGGTTWN-
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCTGTGGCTGGT
--CTGTGGTTTN-
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCTGTGGCTGGT
-GCTGTGGTTT--
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTGTGGCTGGT-
CTTCGTGGGGGGTC
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTCTGTGGCTGGT
------NGCTN--
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCTGTGGCTGGT
-GCTGTG------
 A G T C A G C T A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G C T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T