Information for 1-TTCCCTTTGT (Motif 8)

G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T
Reverse Opposite:
T G C A A T G C G T C A T C G A C G T A A C T G A C T G C A T G C G T A C G T A
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.841
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif245.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets50.5 +/- 22.9bp
Average Position of motif in Background48.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:TTCCCTTTGT-
---CCTTTGTT
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TTCCCTTTGT---
---CCTTTGTTTT
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TTCCCTTTGT-
---CCWTTGTY
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TTCCCTTTGT---
---CCWTTGTYYB
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TTCCCTTTGT---
---YCTTTGTTCC
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TTCCCTTTGT
----CTTTGT
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTCCCTTTGT-----
TGTTCCCATTGTGTACT
 A C G T A C G T G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTCCCTTTGT--
--NCCATTGTTC
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCTTTGT------
TNNTCCTTTGTTCTNNT
 A C G T G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCCCTTTGT------
ANTCCTTTGTCTNNNN
 G C A T A C G T G T A C G T A C A G T C A C G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T