Information for 3-TTASAAGCCTTKGCAC (Motif 3)

A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C
Reverse Opposite:
A C T G C G A T A C T G G T A C G T C A C G T A G T C A A C T G A T C G A G T C G C A T C A G T A T G C A G C T G T C A C G T A
p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.710
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 15.0bp
Average Position of motif in Background25.4 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TTASAAGCCTTKGCAC-
-------NNTTGGCANN
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTASAAGCCTTKGCAC---
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TTASAAGCCTTKGCAC
--------CTTGGCAA
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TTASAAGCCTTKGCAC-
-------CCTTTGATGT
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TTASAAGCCTTKGCAC-
-------CCTTTGAWGT
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTASAAGCCTTKGCAC
--ACATGCCCGGGCAT
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTASAAGCCTTKGCAC
GGTTAGAGACCT------
 A C G T A C G T A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TTASAAGCCTTKGCAC-
--------NTTGGCANN
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTASAAGCCTTKGCAC---
----TGGACTTTGNNCTCN
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TTASAAGCCTTKGCAC
---------TTGGCA-
 A C G T A C G T C T G A T A C G G C T A C G T A C T A G A T G C A G T C A C G T A C G T C A G T A C T G T G A C C G T A T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T