Information for 7-TAATTTAACTTAA (Motif 21)

A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A C G T A A C T G A C G T A C G T C G T A C G T A G T C A A C G T A C G T C G T A
p-value:1e-4
log p-value:-9.394e+00
Information Content per bp:1.947
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 10.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAATTTAACTTAA--
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAATTTAACTTAA--
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAATTTAACTTAA
TAATTTAATTA--
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAATTTAACTTAA
TAATTTAATTA--
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAATTTAACTTAA
GGGTTTAATTAAAATTC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAATTTAACTTAA
TAATTTAATTA--
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAATTTAACTTAA
NNTAATTAGA-----
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAATTTAACTTAA
----TTGACTTTT
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAATTTAACTTAA
TAATYNRATTAR-
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T

UNCX/MA0721.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTAACTTAA
NTAATTAN------
 A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A G T A C A C G T A C G T C G T A C G T A
A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T