Information for 5-GGATGATCCC (Motif 17)

A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C
Reverse Opposite:
T C A G C T A G A T C G T C G A C A G T A T G C T C G A C A G T A T G C T G A C
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.587
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif152.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets54.4 +/- 24.5bp
Average Position of motif in Background53.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGATGATCCC
--ATAATCCC
 A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGATGATCCC-----
AGGCTAATCCCCAANG
 A C G T A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGATGATCCC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGATGATCCC---
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGATGATCCC
CNGTCCTCCC
 A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGATGATCCC-----
NNANTTGACCCCTNNNN
 A C G T A C G T A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGATGATCCC-----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGATGATCCC-
---TGACCYCT
 A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGATGATCCC-----
NNNNTGACCCGGCGCG
 A C G T A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATGATCCC
TKCTGTTCCA
 A C T G T A C G G T C A A G C T T A C G G T C A A G C T T A G C A G T C A G T C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A