Information for 4-AATAAGAAGGATT (Motif 15)

C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C G T A C A C G T A C G T A G T C A G C T A C G T C G T A A C G T C G A T
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.0 +/- 14.3bp
Average Position of motif in Background65.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AATAAGAAGGATT---
------VRGGATTARN
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AATAAGAAGGATT-------
---NANAGGGATTAATTATN
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AATAAGAAGGATT------
--TTAGAGGGATTAACAAT
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AATAAGAAGGATT------
--TGAACCGGATTAATGAA
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AATAAGAAGGATT------
--TGAACCGGATTAATGAA
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AATAAGAAGGATT--
-------NGGATTAA
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AATAAGAAGGATT
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AATAAGAAGGATT
AAATAAGAAAAAAC
 A C G T C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AATAAGAAGGATT-------
---TGAAGGGATTAATCATC
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AATAAGAAGGATT-
------NGGGATTA
 C G T A C G T A A C G T C G T A C T G A A C T G C G T A C G T A A C T G A C T G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A