Information for 4-AGAGACCTAC (Motif 14)

C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.5 +/- 15.2bp
Average Position of motif in Background27.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----AGAGACCTAC
GGTTAGAGACCT--
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGACCTAC
--AGGCCTNG
 C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGACCTAC-----
-TTGACCTANTTATN
 C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGAGACCTAC
TGACCCAGTGACCTAC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGAGACCTAC--
--TGACCTARTT
 C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGAGACCTAC
--AGGCCTAG
 C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGAGACCTAC--
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGACCTAC
-GTGACCTT-
 C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGACCTAC
--TGACCT--
 C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGAGACCTAC--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A