Information for 3-AGAGATTDTGTTC (Motif 13)

C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
Reverse Opposite:
A T C G C T G A C G T A A G T C C G T A G A C T C G T A C G T A A C G T A G T C A C G T A G T C C G A T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 24.5bp
Average Position of motif in Background33.9 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATTDTGTTC
CNGTGATTTN----
 A C G T C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGAGATTDTGTTC-
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAGATTDTGTTC
GCAGTGATTT-----
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGAGATTDTGTTC-
NANAGGGATTAATTATN
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAGATTDTGTTC
--AGATAASR---
 C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGAGATTDTGTTC
TGCTGTGATTT-----
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGATTDTGTTC
--AGATAAGA---
 C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATTDTGTTC
NNGAGATAAGA---
 A C G T C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAGATTDTGTTC--
GAACADWATGTTCTT
 C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGATTDTGTTC---
-NAGATWNBNATCTNN
 C G T A A C T G C G T A A C T G C G T A A C G T G C A T C G T A C G A T A C T G A C G T A G C T A T G C A C G T A C G T A C G T
A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C