Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-29 | -6.794e+01 | 0.0000 | 45.0 | 6.58% | 306.2 | 0.64% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-20 | -4.824e+01 | 0.0000 | 50.0 | 7.31% | 632.0 | 1.33% | motif file (matrix) |
svg |
3 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-8 | -1.851e+01 | 0.0000 | 29.0 | 4.24% | 568.9 | 1.20% | motif file (matrix) |
svg |
4 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-4 | -9.276e+00 | 0.0085 | 15.0 | 2.19% | 322.2 | 0.68% | motif file (matrix) |
svg |
5 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -8.820e+00 | 0.0108 | 33.0 | 4.82% | 1134.0 | 2.39% | motif file (matrix) |
svg |
6 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.401e+00 | 0.0136 | 32.0 | 4.68% | 1111.0 | 2.34% | motif file (matrix) |
svg |
7 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.220e+00 | 0.0140 | 109.0 | 15.94% | 5445.4 | 11.45% | motif file (matrix) |
svg |
8 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-3 | -8.213e+00 | 0.0140 | 4.0 | 0.58% | 21.1 | 0.04% | motif file (matrix) |
svg |
9 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -8.158e+00 | 0.0140 | 30.0 | 4.39% | 1030.0 | 2.17% | motif file (matrix) |
svg |
10 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -8.001e+00 | 0.0140 | 30.0 | 4.39% | 1040.0 | 2.19% | motif file (matrix) |
svg |
11 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.270e+00 | 0.0230 | 36.0 | 5.26% | 1394.4 | 2.93% | motif file (matrix) |
svg |
12 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -6.013e+00 | 0.0742 | 24.0 | 3.51% | 876.0 | 1.84% | motif file (matrix) |
svg |
13 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.685e+00 | 0.0951 | 59.0 | 8.63% | 2839.3 | 5.97% | motif file (matrix) |
svg |
14 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.580e+00 | 0.0981 | 9.0 | 1.32% | 209.5 | 0.44% | motif file (matrix) |
svg |
15 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.404e+00 | 0.1092 | 21.0 | 3.07% | 767.5 | 1.61% | motif file (matrix) |
svg |
16 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.262e+00 | 0.1180 | 21.0 | 3.07% | 777.6 | 1.64% | motif file (matrix) |
svg |
17 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.170e+00 | 0.1217 | 9.0 | 1.32% | 223.6 | 0.47% | motif file (matrix) |
svg |
18 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.136e+00 | 0.1217 | 27.0 | 3.95% | 1099.9 | 2.31% | motif file (matrix) |
svg |
19 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.052e+00 | 0.1225 | 19.0 | 2.78% | 691.5 | 1.45% | motif file (matrix) |
svg |
20 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -4.759e+00 | 0.1560 | 31.0 | 4.53% | 1352.3 | 2.84% | motif file (matrix) |
svg |
21 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.712e+00 | 0.1560 | 7.0 | 1.02% | 159.2 | 0.33% | motif file (matrix) |
svg |
22 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -4.669e+00 | 0.1560 | 9.0 | 1.32% | 242.8 | 0.51% | motif file (matrix) |
svg |
23 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -4.658e+00 | 0.1560 | 16.0 | 2.34% | 569.0 | 1.20% | motif file (matrix) |
svg |