Information for 4-RAGCTGCWTGGCAGRG (Motif 4)

C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
Reverse Opposite:
A T G C G A C T A G T C G C A T A T C G A T G C G A T C C G T A C G A T A T C G A T G C C G T A A T C G A G T C C G A T A G C T
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.723
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.2 +/- 25.4bp
Average Position of motif in Background52.2 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RAGCTGCWTGGCAGRG
-NGCTN----------
 C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RAGCTGCWTGGCAGRG-
--GGGGCTYGKCTGGGA
 C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RAGCTGCWTGGCAGRG
AGCAGCTGCT--------
 A C G T A C G T C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---RAGCTGCWTGGCAGRG
AGAGTGCTGATTGGTCCA-
 A C G T A C G T A C G T C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----RAGCTGCWTGGCAGRG
NNAGCAGCTGCT--------
 A C G T A C G T A C G T A C G T C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RAGCTGCWTGGCAGRG
CAGCTGNT--------
 C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---RAGCTGCWTGGCAGRG
CAGCAGCTGN---------
 A C G T A C G T A C G T C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:RAGCTGCWTGGCAGRG
----TGCGTGGGCGT-
 C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
A C G T A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RAGCTGCWTGGCAGRG
GCAGCTGTNN-------
 A C G T C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RAGCTGCWTGGCAGRG
HCAGCTGDTN-------
 A C G T C T G A G C T A A C T G A T G C C G A T A T C G A T G C G C T A A C G T C A T G A T C G A T G C C G T A A C T G C T G A T A C G
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T