Information for 2-ADCTVTGTGCCATCTA (Motif 2)

G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
Reverse Opposite:
A C G T C G T A A C T G G T C A A G C T C T A G A C T G A G T C C T G A G T A C G T C A A T G C C T G A C T A G G T C A C G A T
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 24.5bp
Average Position of motif in Background23.7 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ADCTVTGTGCCATCTA
NNNNTTGTGTGCTTNN--
 A C G T A C G T G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA
------ATGCCAACC-
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ADCTVTGTGCCATCTA
----CTGTTCCTGG--
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ADCTVTGTGCCATCTA
NNGCGTGTGTGCNGCN--
 A C G T A C G T G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA--
--------GCCATCTGTT
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA---
---ACTATGCCAACCTACC
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA
-------TGTCANYT-
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA
------ATGCCCACC-
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA
-----GGTGCCAAGT-
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ADCTVTGTGCCATCTA-------
---ANAGTGCCACCTGGTGGCCA
 G C T A C A G T A G T C A G C T T A C G A C G T A C T G G A C T A C T G A G T C A G T C T C G A A C G T A G T C A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A