Information for 10-ATGACACAGGTGA (Motif 18)

G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
Reverse Opposite:
C G A T G T A C C G T A A T G C G T A C G C A T A C T G A C G T A C T G A C G T A G T C G C T A A C G T
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.681
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.5 +/- 20.2bp
Average Position of motif in Background52.5 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATGACACAGGTGA
ATGCAACAGGTGG
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATGACACAGGTGA--
GAGCAACAGGTGGTT
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGACACAGGTGA
-TGACACCTGTCA
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ATGACACAGGTGA--
-----VCAGGTRDRY
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGACACAGGTGA
TTGACAG------
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGACACAGGTGA
TAGGGCAAAGGTCA
 A C G T G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGACACAGGTGA
GTAGGGCAAAGGTCA
 A C G T A C G T G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:ATGACACAGGTGA--
------CAGGTGAGG
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGACACAGGTGA
-TGACACCTGTCA
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGACACAGGTGA
-TGACAGCTGTCA
 G T C A C G A T A C T G G T C A G T A C G T C A G T A C C G T A C A T G A T C G C G A T C A T G C G T A
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A