p-value: | 1e-11 |
log p-value: | -2.553e+01 |
Information Content per bp: | 1.806 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.3 +/- 20.4bp |
Average Position of motif in Background | 29.2 +/- 12.5bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGCCCAVTGCCAAGC TTGGCANNNTGCCAAG- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGCCCAVTGCCAAGC TGGCACCATGCCAA-- |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGCCCAVTGCCAAGC TGGCAGNCTGCCAG-- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AGGCCCAVTGCCAAGC ------GGTGCCAAGT |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AGGCCCAVTGCCAAGC ------CGTGCCAAG- |
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ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGGCCCAVTGCCAAGC-- YCAGGCWCAGTACCAGGCTC |
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NFIC/MA0161.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | AGGCCCAVTGCCAAGC --------TGCCAA-- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | AGGCCCAVTGCCAAGC -------ATGCCAACC |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | AGGCCCAVTGCCAAGC -------TTGCCAAG- |
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GLIS2/MA0736.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGGCCCAVTGCCAAGC -GACCCCCCGCGAAG- |
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