Information for 6-GGCAAGTATGAATGTT (Motif 8)

C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
Reverse Opposite:
C T G A C T G A G T A C G C T A A G C T A G C T G T A C G C T A A G C T T G C A A G T C A G C T C A G T T A C G T A G C G A T C
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.682
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.9 +/- 18.2bp
Average Position of motif in Background49.9 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCAAGTATGAATGTT
AAGGCAAGTGT-------
 A C G T A C G T C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCAAGTATGAATGTT
-NNTNTCATGAATGT-
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCAAGTATGAATGTT---
--NTTNTATGAATGTGNNC
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCAAGTATGAATGTT
---AGGTGTTAAT---
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCAAGTATGAATGTT
---AGGTGTGAAA---
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGCAAGTATGAATGTT
CGTCACGCATGACTGCA
 A C G T C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGCAAGTATGAATGTT
------NTGGAATGTN
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCAAGTATGAATGTT
CGTCACGCATGACTGCA
 A C G T C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCAAGTATGAATGTT
--AAGGTGTGAA----
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGCAAGTATGAATGTT
---AGGTGTGAAM---
 C A T G A C T G A T G C G C T A C T G A A C T G A C G T T C G A C A G T A C T G T C G A C T G A C A G T A C T G A G C T A G C T
A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T