Information for 10-TGCACGTTGTGTG (Motif 24)

A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G
Reverse Opposite:
A G T C C G T A A T G C C G T A A T G C C T G A C G T A A T G C C T A G C A G T C T A G A G T C C G T A
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.734
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif73.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets40.4 +/- 25.3bp
Average Position of motif in Background45.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCACGTTGTGTG-----
--NNNNTTGTGTGCTTNN
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0177.1_Sox7_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCACGTTGTGTG--------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCACGTTGTGTG
CCTTGCAATTTTTNN-
 A C G T A C G T A C G T A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGCACGTTGTGTG-
AGATTCTTATCTGT
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGCACGTTGTGTG
-GCACGTAY----
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGCACGTTGTGTG
AACACTGCACATTGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGCACGTTGTGTG---
-----CTTGAGTGGCT
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGCACGTTGTGTG--
NNNCCATTGTGTNAN
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TGCACGTTGTGTG
TGTCGGTT-----
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGCACGTTGTGTG
BGCACGTA-----
 A C G T A C T G A G T C G C T A A G T C A T C G A C G T A G C T T A C G C G A T A T C G C G A T C T A G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T