Information for 2-GCAGAGTGCGCTC (Motif 2)

A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G G T A C A T C G A T G C G T C A G T A C A C G T A G T C A C G T A C T G A G T C
p-value:1e-14
log p-value:-3.413e+01
Information Content per bp:1.863
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 16.6bp
Average Position of motif in Background61.1 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCAGAGTGCGCTC---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCAGAGTGCGCTC
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGAGTGCGCTC
CCAGACRSVB---
 A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGTGCGCTC
TGCTGASTCAGC--
 A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAGAGTGCGCTC
-CAGTGTGGTCGC
 A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GCAGAGTGCGCTC
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

MAFG/MA0659.1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCAGAGTGCGCTC---
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:8
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GCAGAGTGCGCTC-
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGTGCGCTC---
CGAACAGTGCTCACTAT
 A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGTGCGCTC
AACAGATGGC----
 A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A T C G T A G C A C T G A G T C A C G T G T A C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T