Information for 6-GCACTCACGCTGCTCT (Motif 7)

A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
Reverse Opposite:
G T C A A C T G T C G A C A T G G A T C T C G A A T C G A G T C A C T G A G C T A C T G G C T A A C T G G C A T A C T G A G T C
p-value:1e-11
log p-value:-2.663e+01
Information Content per bp:1.665
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif27.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets66.1 +/- 14.5bp
Average Position of motif in Background46.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCACTCACGCTGCTCT
AGCGGCACACACGCAA----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCACTCACGCTGCTCT
-----CACGCA-----
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCACTCACGCTGCTCT
-CRCCCACGCA-----
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCACTCACGCTGCTCT
YCCGCCCACGCN-----
 A C G T A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCACTCACGCTGCTCT
--TBGCACGCAA----
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCACTCACGCTGCTCT
---GGCACGCGTC---
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCACTCACGCTGCTCT
ACGCCCACGCA-----
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCACTCACGCTGCTCT
-CNGTCACGCCAC---
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCACTCACGCTGCTCT
-GTGCCACGCGACTG-
 A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCACTCACGCTGCTCT
AGCCACTCAAG-------
 A C G T A C G T A C T G A G T C C G T A A G T C C G A T G T A C T C G A A G T C C T A G A T G C A C G T C T A G G T A C A G C T T A G C C A G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T