Information for 3-GGAKCCCTGCCGGGAA (Motif 5)

A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A
Reverse Opposite:
A G C T A C G T A T G C A G T C G A T C A T C G A T C G A G T C C G T A C T A G A T C G A C T G G T C A A C G T A G T C A G T C
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.759
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.3 +/- 32.0bp
Average Position of motif in Background55.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA
------CTTCCNGGAA
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA-
------CTTCTGGGAAA
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA
------CWGGCGGGAA
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA--
----NNCTTCCNGGAAGN
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA
GGCCYCCTGCTGDGH-
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA----
------TTTCCAGGAAATGG
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAKCCCTGCCGGGAA
TGGCAGNCTGCCAG---
 A C G T A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA-
-----NTTTCCNGGAAA
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA-
------TTTCCAGGAAA
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAKCCCTGCCGGGAA-
-----BTKGGCGGGAAA
 A C T G C T A G G T C A C A G T G T A C T A G C A G T C C G A T A C T G A T G C A T G C C A T G A C T G A T C G G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A