Information for 2-GCCHAAACAGAVACTT (Motif 3)

A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
Reverse Opposite:
C G T A C G T A A T C G A C G T A C G T A C G T A G T C C G A T A T C G A G C T A C G T A C G T C A T G C T A G A C T G A G T C
p-value:1e-14
log p-value:-3.286e+01
Information Content per bp:1.797
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 22.3bp
Average Position of motif in Background43.1 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8/MA0652.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCHAAACAGAVACTT
-TCGAAACCGAAACT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCHAAACAGAVACTT
-ACGAAAGCGAAAGT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCCHAAACAGAVACTT
---GAAACTGAAACT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCHAAACAGAVACTT
TGCCAAAATAAACANN-
 A C G T A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCHAAACAGAVACTT
---GAAAGTGAAAGT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCHAAACAGAVACTT
---GAAAGTGAAAGT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCHAAACAGAVACTT
---GAAAMTGAAACT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCHAAACAGAVACTT
---GAAASYGAAASY-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCHAAACAGAVACTT
AACGAAACCGAAACT-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCHAAACAGAVACTT
---GRAASTGAAAST-
 A C T G A G T C A G T C G A T C C G T A G T C A C T G A A T G C C G T A A C T G C G T A T C G A C G T A A T G C A C G T C G A T
A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T