Information for 8-GCCGCTGCAG (Motif 26)

A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
Reverse Opposite:
A T G C C G A T A C T G A G T C G T C A A C T G A T G C C A T G A T C G G T A C
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.833
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.94%
Number of Background Sequences with motif526.1
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets54.3 +/- 25.4bp
Average Position of motif in Background49.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTGCAG
CGCAGCTGCG-
 A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGCTGCAG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTGCAG-
AGCAGCTGCTNN
 A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCCGCTGCAG----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTGCAG
AGCAGCTGCT-
 A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTGCAG
GACAGCTGCAG
 A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCTGCAG
CAGCAGCTGN--
 A C G T A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCCGCTGCAG
NNACAGCTGC--
 A C G T A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTGCAG
AACAGCTGCAG
 A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCCGCTGCAG
NGNGACAGCTGCN-
 A C G T A C G T A C G T A C G T A C T G A T G C G T A C T A C G A G T C C A G T A C T G A G T C C G T A T A C G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T