Information for 13-GCATGGGCTTCAGACA (Motif 22)

A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A
Reverse Opposite:
C A G T A T C G A C G T A T G C G C A T T A C G T G C A C T G A A C T G A T G C G T A C G T A C G T C A C A G T A T C G T A G C
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.481
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 26.1bp
Average Position of motif in Background41.3 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:GCATGGGCTTCAGACA-
---------BCAGACWA
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GCATGGGCTTCAGACA-
---------CCAGACAG
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GCATGGGCTTCAGACA---
---------CCAGACRSVB
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCATGGGCTTCAGACA
------GCTTCC----
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCATGGGCTTCAGACA
TGCGTGGGCGT------
 A C G T A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCATGGGCTTCAGACA-
----AGGTGNCAGACAG
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCATGGGCTTCAGACA-
-CTTGGCANNNTGCCAA
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCATGGGCTTCAGACA
-AAGGKGRCGCAGGCA
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCATGGGCTTCAGACA-----
----CAAATCCAGACATCACA
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCATGGGCTTCAGACA
----AGGTGHCAGACA
 A T C G T A G C G T C A C A G T C A T G C A T G T A C G T G A C G A C T A C G T A T G C C G T A A T C G T G C A T A G C G T C A
A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A