Information for 9-AGTCAAACAG (Motif 8)

C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
Reverse Opposite:
A G T C A C G T C T A G C G A T A C G T C G A T A C T G G T C A A G T C A C G T
p-value:1e-12
log p-value:-2.795e+01
Information Content per bp:1.896
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif81.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.5 +/- 24.7bp
Average Position of motif in Background45.4 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGTCAAACAG
AAAAGTCAA----
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAAACAG------
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAAACAG
NATTCAAAT--
 A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAAACAG----
BAGTCATANTGAAAG
 A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G A C G T A C G T A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTCAAACAG---
---NHAACBGYYV
 C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAAACAG
TGAGTCA-----
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTCAAACAG
SCTGTCAVTCAV
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTCAAACAG
AAATAAACA-
 C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGTCAAACAG
NCTGTCAATCAN
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTCAAACAG
--CCAATCAA
 C G T A A C T G A C G T A G T C C G T A C G T A C G T A A G T C G T C A C T A G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A