Information for 3-CTCMKGGGAACTTCTG (Motif 5)

A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A C T A G C T G A C G T A T C A G C G A T A C G T A T G C A T G C A G T C T G C A A C G T A T C G C G T A A T C G
p-value:1e-14
log p-value:-3.277e+01
Information Content per bp:1.722
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 24.0bp
Average Position of motif in Background48.7 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTCMKGGGAACTTCTG
-----GGGAATTTCC-
 A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTCMKGGGAACTTCTG
NGTCCCNNGGGA-------
 A C G T A C G T A C G T A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCMKGGGAACTTCTG
----GGGGATTTCC--
 A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCMKGGGAACTTCTG
---NGGGGATTTCCC-
 A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCMKGGGAACTTCTG
-----GGGGATTTCC-
 A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCMKGGGAACTTCTG
ANTCCCTNGGGAAT-----
 A C G T A C G T A C G T A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCMKGGGAACTTCTG
--CSTGGGAAAD----
 A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCMKGGGAACTTCTG
-----GGGAATTTCC-
 A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCMKGGGAACTTCTG
RGSMTBCTGGGAAAT----
 A C G T A C G T A C G T A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCMKGGGAACTTCTG
GTCCCCAGGGGA-------
 A C G T A C G T A C G T A T G C C G A T A T G C G T C A A C G T A C T G A T C G A T C G T C G A C G T A A G T C A C G T G A C T A G T C A C G T A T C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T