p-value: | 1e-5 |
log p-value: | -1.218e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.40% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.3 +/- 25.3bp |
Average Position of motif in Background | 21.4 +/- 15.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0183.1_Sry_2/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CACAATAAACGTG TCACGGAACAATAGGTG-- |
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CDX1/MA0878.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CACAATAAACGTG -GCAATAAAA--- |
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Sox17/MA0078.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAATAAACGTG GACAATGNN---- |
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HOXA13/MA0650.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CACAATAAACGTG -CCAATAAAAA-- |
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HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CACAATAAACGTG- ------RTACGTGC |
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HOXB13/MA0901.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CACAATAAACGTG -CCAATAAAAC-- |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CACAATAAACGTG ---GCTAAACGGT |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CACAATAAACGTG CTCACACAATGGCGC-- |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CACAATAAACGTG NNNNNGAACAATTGANN-- |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CACAATAAACGTG TAGTGAACAATAGATTT- |
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