Information for 18-CAATATTTGMTTGGYT (Motif 29)

G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C T A G C G T C A G T C A A C T G A T G C C T G A C T G A C G T A C G A T G T C A C A G T A C G T A C T G
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.712
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 25.1bp
Average Position of motif in Background55.1 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT-
-NNAATTTTATTGGNTN
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T
A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT---
-------TGATTGGCTANN
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT---
---NNNTTAATTGGTTTTN
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT-----
------CTGATTGGTCNATTT
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT
----NTTTTATTGG--
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT---
---GNNTTAATTGGTTGTT
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT
----NTTTTATTGG--
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT--
-ATTCNTTAATTGCTTGT
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T
A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT--
-ATTCNTTAATTGCTTGT
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T
A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAATATTTGMTTGGYT--
-NNNNGTTGATTGGGTCG
 G T A C T G C A G T C A C A G T G C T A A C G T A G C T A G C T T A C G G T A C A C G T A C G T A T C G C T A G A G C T A C G T A C G T A C G T
A C G T A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G