Information for 10-TATTAGCCAA (Motif 28)

A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A
Reverse Opposite:
A C G T A C G T A T C G C T A G A G T C A C G T C G T A G T C A A C G T C G T A
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 33.6bp
Average Position of motif in Background50.3 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TATTAGCCAA--
AATATTAATAAAGA
 A C G T A C G T A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TATTAGCCAA---
-ACTAGCCAATCA
 A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TATTAGCCAA
----TGCCAA
 A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TATTAGCCAA-
--CGTGCCAAG
 A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTAGCCAA---
NNAATTAGTCACGGT
 A C G T A C G T A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATTAGCCAA
-AAAAGTCAA
 A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PH0036.1_Gsx2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TATTAGCCAA-
AGGTTAATTAGCTGAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TATTAGCCAA
--BCAGACWA
 A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TATTAGCCAA--
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TATTAGCCAA----
----AGCCAATCGG
 A C G T C G T A A C G T C G A T C G T A A C T G A G T C A T G C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G