Information for 13-TGCCWGMKTTGKT (Motif 27)

A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
Reverse Opposite:
C G T A G T C A A T G C C G T A C G T A G T A C A C T G A G T C C G A T A C T G A C T G G T A C C G T A
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.4 +/- 23.1bp
Average Position of motif in Background47.7 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCCWGMKTTGKT
ATGCCAACC-----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCWGMKTTGKT
TTGCCAAG------
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCCWGMKTTGKT
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGCCWGMKTTGKT--
-----CCATTGTTNY
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCCWGMKTTGKT
ATGCCCACC-----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCWGMKTTGKT
TGCCAA-------
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGCCWGMKTTGKT
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGCCWGMKTTGKT--
-----YCTTTGTTCC
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCCWGMKTTGKT
ATGCCAGACN----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGCCWGMKTTGKT
-------ATTGTT
 A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T