Information for 13-CCGATGCAGGGCAGCT (Motif 17)

A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T
Reverse Opposite:
C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T A C T G T A G C G T C A A C G T A G T C C T A G A T C G
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.773
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 25.8bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCGATGCAGGGCAGCT
-----TNNGGGCAG--
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCGATGCAGGGCAGCT---
------NGNGACAGCTGCN
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.59
Offset:9
Orientation:forward strand
Alignment:CCGATGCAGGGCAGCT----
---------GACAGCTGCAG
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CCGATGCAGGGCAGCT---
-------NNAGCAGCTGCT
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCGATGCAGGGCAGCT
---ATCAAGGTCA---
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:CCGATGCAGGGCAGCT---
---------AGCAGCTGCT
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CCGATGCAGGGCAGCT----
----------GCAGCTGTNN
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCGATGCAGGGCAGCT------
-----NNNNAGCAGCTGCTGAN
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.57
Offset:9
Orientation:forward strand
Alignment:CCGATGCAGGGCAGCT----
---------AACAGCTGCAG
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:10
Orientation:forward strand
Alignment:CCGATGCAGGGCAGCT----
----------NCAGCTGCTG
 A T G C A G T C C T A G T G C A A C G T A C T G T G A C T C G A A C T G A C T G A C T G A G T C C G T A C T A G A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G