Information for 4-TKCCTGGCWSSCAMAR (Motif 4)

A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C T G A T C G T A C G C G T A A C T G A G T C A G T C C G T A A C T G A C T G G T A C G T C A
p-value:1e-11
log p-value:-2.656e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 26.9bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TKCCTGGCWSSCAMAR
-GSCTGTCACTCA---
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TKCCTGGCWSSCAMAR
CTGGCAGNCTGCCA---
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TKCCTGGCWSSCAMAR
--NTTGGCANN-----
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TKCCTGGCWSSCAMAR
TTTCCTAGAAAGCA---
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TKCCTGGCWSSCAMAR
---TTGGCA-------
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TKCCTGGCWSSCAMAR
--CTTGGCAA------
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TKCCTGGCWSSCAMAR
--NCTGTCAATCAN--
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TKCCTGGCWSSCAMAR
NCTTCCNGGAAGNN----
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TKCCTGGCWSSCAMAR
TTCCNGGAAG------
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TKCCTGGCWSSCAMAR
TTTCCTGGAAAGNNN--
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C C G A T A T C G A T G C A G T C C G T A G T A C C G T A C T A G
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T A C G T