Information for 5-CGCCTATAGG (Motif 20)

G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T C G T A A C G T C G T A A C T G A C T G A G T C C A T G
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.874
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.9 +/- 20.8bp
Average Position of motif in Background58.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCCTATAGG---
CCGCCCAAGGGCAG
 A C G T G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTATAGG---
NTGCCCANNGGTNA
 A C G T G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCCTATAGG--
TGCCCNGGGGCA
 G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCCTATAGG--
TGCCCTNGGGCA
 G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCCTATAGG--
TGCCCTNGGGCA
 G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCCTATAGG---
TTGCCCTAGGGCAT
 A C G T G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCTATAGG
NNGGCCACGCCTTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGCCTATAGG--
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCTATAGG---
TGCCCTNAGGGCA
 G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCCTATAGG
AGCCAATCGG
 G T A C A C T G A G T C A G T C A C G T C G T A G A C T C T G A A C T G A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G