p-value: | 1e-9 |
log p-value: | -2.133e+01 |
Information Content per bp: | 1.853 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.95% |
Number of Background Sequences with motif | 15.5 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 56.3 +/- 22.3bp |
Average Position of motif in Background | 55.7 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.12 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GCCCGAGTCTGGM-- -----GGTCTGGCAT |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCCCGAGTCTGGM --VBSYGTCTGG- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCCGAGTCTGGM---- NNTNNTGTCTGGNNTNG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCCCGAGTCTGGM ----CTGTCTGG- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCCCGAGTCTGGM ----TWGTCTGV- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GCCCGAGTCTGGM---- -----TGTCTGDCACCT |
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NFIC/MA0161.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GCCCGAGTCTGGM- --------TTGGCA |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GCCCGAGTCTGGM-- -----WDNCTGGGCA |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GCCCGAGTCTGGM-- -----TGTCTAGACG |
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Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GCCCGAGTCTGGM-------- ------GYCTGGYYTNTGTCA |
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