Information for 1-CAGTCCACAGCCCTGC (Motif 1)

A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C T A G T A C G A C T G G T A C C G A T A C T G A C G T A T C G A T C G C G T A A G T C C G A T A C T G
p-value:1e-19
log p-value:-4.437e+01
Information Content per bp:1.791
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 24.2bp
Average Position of motif in Background51.7 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGTCCACAGCCCTGC
CAGATGTGCACATACGT--
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCACAGCCCTGC
SSAATCCACANN-----
 A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCACAGCCCTGC
TCCAATCCACA-------
 A C G T A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGTCCACAGCCCTGC
--ATCCAC--------
 A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCCACAGCCCTGC
NTNTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCACAGCCCTGC
SCTGTCARCACC-----
 A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAGTCCACAGCCCTGC
-----CACAGN-----
 A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCACAGCCCTGC
TATGTAAACANG-----
 A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAGTCCACAGCCCTGC
-AAACCACAGAN----
 A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCCACAGCCCTGC
GGCAAAAGTCCAATAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A T G C A T G C C G T A A G T C C G T A A C T G G T A C A T G C A G T C C G A T A T C G A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T A C G T A C G T