Information for 12-TGTTGAACAA (Motif 33)

A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C G T C A
p-value:1e-5
log p-value:-1.328e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 26.5bp
Average Position of motif in Background53.2 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGTTGAACAA-
-GTTGCGCAAT
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGTTGAACAA-------
TAGTGAACAATAGATTT
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGTTGAACAA-------
-AATGAACAATGGAATT
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGTTGAACAA-
-----AACAAT
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGTTGAACAA-
--GTAAACAAT
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGAACAA------
NNNNNGAACAATTGANN
 A C G T A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTTGAACAA------
TTTAGAACAATAAAAT
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TGTTGAACAA----
----GAACAATGGN
 A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTTGAACAA----------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGTTGAACAA------
TCACGGAACAATAGGTG
 A C G T A C G T A C T G A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G