Information for 8-SWATGKTAKG (Motif 29)

T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G
Reverse Opposite:
A T G C T G A C G C A T T C G A G T C A G T A C G C T A A C G T G C A T A T C G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.465
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif127.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets60.7 +/- 26.4bp
Average Position of motif in Background48.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--SWATGKTAKG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--SWATGKTAKG
NNATAAGGNN--
 A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--SWATGKTAKG-----
TATTATGGGATGGATAA
 A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

SOX21/MA0866.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--SWATGKTAKG---
AACAATGGTAGTGTT
 A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--SWATGKTAKG
GGGAATTGTAGT
 A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----SWATGKTAKG--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--SWATGKTAKG---
AACAATGNTATTGTT
 A C G T A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:SWATGKTAKG--
--NTTTTATGAC
 T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:SWATGKTAKG-----
NNNTGTTGTTGTTNG
 T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-SWATGKTAKG-----
NNANTTTTATTGGNNN
 A C G T T A G C C G T A T G C A C G A T C A T G C A G T A G C T C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G